Publications

Newman, S. A. (2022). Self-organization in embryonic development: myth and reality. In Self-Organization as a New Paradigm in Evolutionary Biology: From Theory to Applied Cases in the Tree of Life” (p. 36).

Newman, S. A. (n.d.). Inherency and agency in the origin and evolution of biological functions. "Inherency and Agency in the Origin and Evolution of Biological Functions." Biological Journal of the Linnean Society, blac109

Newman, S.A. (2012). "Physico-genetic determinants in the evolution of development." Science 338:217–219.

Newman, S.A. (2016). "’Biogeneric’ developmental processes: drivers of major transitions in animal evolution." Philosophical Transactions of the Royal Society B: Biological Sciences 371(1701). https://doi.org/10.1098/rstb.2015.0443.>

Nuño de la Rosa, L., & Villegas, C. (2022). Chances and Propensities in Evo-Devo. The British Journal for the Philosophy of Science, 73(2), 509–533.

Palakkan, A. A., Tarnick, J., Waterfall, M., Sallam, M., Glykofrydis, F., Elhendawi, M., & Davies, J. A. (2022). Production of kidney organoids arranged around single ureteric bud trees, and containing endogenous blood vessels, solely from embryonic stem cells. Scientific Reports, 12(1), 12573.

Pally, D., Goutham, S., & Bhat, R. (2022). Extracellular matrix as a driver for intratumoral heterogeneity. Physical Biology, 19(4), 043001.

Parke, E. C., & Plutynski, A. (2023). Going big by going small: Trade-offs in microbiome explanations of cancer. Studies in History and Philosophy of Science, 97, 101–110.

Pavličev, M., & Wagner, G. P. (2022). The value of broad taxonomic comparisons in evolutionary medicine: Disease is not a trait but a state of a trait! MedComm, 3(4).

Plutynski, A. (2022). On Explaining Peto’s Paradox. European Journal of Epidemiology.

Plutynski, A. (2022). Philosophical issues in cancer and public health. In A. Broadbent & S. Venkatapuram, The Routledge Handbook of Philosophy of Public Health (1st ed., pp. 393–406). Routledge.

Poliseli, L., Coutinho, J. G. E., Viana, B., Russo, F., & El-Hani, C. N. (2022). Philosophy of science in practice in ecological model building. Biology & Philosophy, 37(4), 21.

Pollen, A. A., Kilik, U., Lowe, C. B., & Camp, J. G. (2023). Human-specific genetics: new tools to explore the molecular and cellular basis of human evolution. Nature Reviews Genetics.

Pontarotti, G. (2022). L’hérédité Pétoeunrduunee ebniologie mbiolmécéudleaciirnee. 38.

Pontarotti, G., Dussault, A. C., & Merlin, F. (2022). Conceptualizing the Environment in Natural Sciences: Guest Editorial. Biological Theory, 17(1), 1–3.

Pontarotti, G., Mossio, M., & Pocheville, A. (2022). The genotype–phenotype distinction: from Mendelian genetics to 21st century biology. Genetica.

Reed, W. J., Ison, J. L., Waananen, A., Shaw, F. H., Wagenius, S., & Shaw, R. G. (2022). Genetic variation in reproductive timing in a long‐lived herbaceous perennial. American Journal of Botany, 109(11), 1861–1874.

Richards, R.J. (2000). "Kant and Blumenbach on the Bildungstrieb: a historical misunderstanding." Studies in History and Philosophy of Biological and Biomedical Sciences 31:11-32.

Scott-Phillips, T.C., K.N. Laland, D.M. Shuker, T.E. Dickins and S.A. West. (2014). "The niche construction perspective: a critical appraisal." Evolution 68(5):1231–1243.

Smith, J.E.H., ed. (2006). The Problem of Animal Generation in Early Modern Philosophy. New York: Cambridge University Press.

Sultan, S.E. (2015). Organism and Environment: Ecological Development, Niche Construction, and Adaptation. New York: Oxford University Press.

Takacs, P., & Bourrat, P. (2022). The arithmetic mean of what? A Cautionary Tale about the Use of the Geometric Mean as a Measure of Fitness. Biology & Philosophy, 37(2), 12.

Walsh, D. (2022). Environment as Abstraction. Biological Theory, 17(1), 68–79.

Wucherpfennig, J. I., Howes, T. R., Au, J. N., Au, E. H., Roberts Kingman, G. A., Brady, S. D., Herbert, A. L., Reimchen, T. E., Bell, M. A., Lowe, C. B., Dalziel, A. C., & Kingsley, D. M. (2022). Evolution of stickleback spines through independent cis-regulatory changes at HOXDB. Nature Ecology & Evolution.

Zambre, A. M., Burns, L., Suresh, J., Hegeman, A. D., & Snell-Rood, E. C. (n.d.). Developmental plasticity in multimodal signals: light environment produces novel signalling phenotypes in a butterfly. 6.