Resources

Directionality in Development and Evolution

Newman, S.A. (2016). "’Biogeneric’ developmental processes: drivers of major transitions in animal evolution." Philosophical Transactions of the Royal Society B: Biological Sciences 371(1701). https://doi.org/10.1098/rstb.2015.0443.

Travassos-Britto, B., Pardini, R., El-Hani, C. N., & Prado, P. I. (2021). A pragmatic approach for producing theoretical syntheses in ecology. PLoS ONE, 16(12 December). https://doi.org/10.1371/journal.pone.0261173.

Moreno, A. (2007). “A systemic approach to the origin of biological organization.” In Systems Biology: Philosophical Foundations. Edited by F.C. Boogerd, F.J. Bruggeman, J.S. Hofmeyr and H.V. Westerhoff. Amsterdam: Elsevier.

McShea, D.W. and R.N. Brandon. (2010). Biology’s First Law: The Tendency for Diversity and Complexity to Increase in Biological Systems. Chicago: University of Chicago Press.

Roy, R., Moreno, N., Brockman, S. A., Kostanecki, A., Zambre, A., Holl, C., Solhaug, E. M., Minami, A., Snell-Rood, E. C., Hampton, M., Bee, M. A., Chiari, Y., Hegeman, A. D., & Carter, C. J. (2022). Convergent evolution of a blood-red nectar pigment in vertebrate-pollinated flowers. Proceedings of the National Academy of Sciences, 119(5), e2114420119.

Michod, R.E. and Roze, D. (2001). “Cooperation and conflict in the evolution of multicellularity.” Heredity 86:1–7.

Brun-Usan, M., Rago, A., Thies, C., Uller, T., & Watson, R. A. (2021). Development and selective grain make plasticity “take the lead” in adaptive evolution. BMC Ecology and Evolution, 21(1), 205.

Gilbert, S.F. and D. Epel (2009). Ecological Developmental Biology: Integrating Epigenetics, Medicine, and Evolution. Sunderland: Sinauer.

Black, A.J., Bourrat, P. and Rainey, P.B. (2020). “Ecological scaffolding and the evolution of individuality.” Nature Ecology & Evolution 4:426–436.

Laland, K.N., J. Odling-Smee, and S.F. Gilbert. (2008). “EvoDevo and Niche Construction: Building Bridges.” Journal of Experimental Zoology 310B:549–566.

Buss, L. (1987). The Evolution of Individuality. Princeton: Princeton University Press.

Michod, R.E. (2007). “Evolution of individuality during the transition from unicellular to multicellular life.” Proceedings of the National Academy of Sciences, United States of America 104(suppl 1):8613–8618.

Bourrat, P. (2019). “Evolutionary transitions in heritability and individuality.” Theory in Biosciences 138:305–323.

Love, A. C., Grabowski, M., Houle, D., Liow, L. H., Porto, A., Tsuboi, M., Voje, K. L., & Hunt, G. (2021). Evolvability in the fossil record. Paleobiology, 1–24.

Love, A.C., Grabowski, M., Houle, D., Hsiang Liow, L., Porto, A., Tsuboi, M., Voje, K.L. and Hunt, G. (2021). “Evolvability in the fossil record.” Paleobiology 1–24. Doi:10/1017/pab.2021.36.

Laland K.N., T. Uller T, M.W. Feldman, K. Sterelny K, G.B. Müller, A. Moczek A, E. Jablonka, and J. Odling-Smee. (2015). “The extended evolutionary synthesis: its structure, assumptions and predictions.” Proceedings of the Royal Society, Part B 282. 20151019. http://dx.doi.org/10.1098/rspb.2015.1019.

Newman, S.A. (2022). “Form, function, agency: sources of natural purpose in animal evolution.” In Evolution ‘on Purpose’: Teleonomy in Living Systems. Edited by P. Corning, D. Noble, J. Shapiro and R. Vane-Wright. Cambridge (MA): The MIT Press.

Deakin, W. J., Anderson, P. SL., den Boer, W., Smith, T. J., Hill, J. J., Rücklin, M., Donoghue, P. CJ., & Rayfield, E. J. (2022). Increasing morphological disparity and decreasing optimality for jaw speed and strength during the radiation of jawed vertebrates. Science Advances, 8(11), 13.

Maynard Smith. J. and Szathmary, E. (1995). The Major Transitions in Evolution. Oxford: Oxford University Press.

Sterelny, K. and Calcott, B. (2011). The Major Transitions in Evolution Revisited. Cambridge (MA): The MIT Press.

Scott-Phillips, T.C., K.N. Laland, D.M. Shuker, T.E. Dickins and S.A. West. (2014). "The niche construction perspective: a critical appraisal." Evolution 68(5):1231–1243.

Dang, C. C., Minh, B. Q., Mcshea, H., Masel, J., James, J. E., Sy, L., & Lanfear, R. (2022). nQMaker: Estimating Time Nonreversible Amino Acid Substitution Models. Systematic Biology, 14.

Sultan, S.E. (2015). Organism and Environment: Ecological Development, Niche Construction, and Adaptation. New York: Oxford University Press.

Sepkoski Jr., J.J., Bambach, R.K., Raup, D.M. and Valentine, J.W. (1981). “Phanerozoic marine diversity and the fossil record.” Nature 291:435–437.

Alroy, J., M. Aberhan, D.J. Bottjer, M. Foote, F.T. Fürsich, P.J. Harries, A.J.W. Hendy, S.M. Holland, L.C. Ivany, W. Kiessling, M.A. Kosnik, C.R. Marshall, A.J. McGowan, A.I. Miller, T.D. Olszewski, M.E. Patzkowsky, S.E. Peters, L. Villier, P.J. Wagner, N. Bonuso, P.S. Borkow, B. Brenneis, M.E. Clapham, L.M. Fall, C.A. Ferguson, V.L. Hanson, A.Z. Krug, K.M. Layou, E.H. Leckey, S. Nürnberg, C.M. Powers, J.A. Sessa, C. Simpson, A. Tomašových, C.C. Visaggi. (2008). “Phanerozoic trends in the global diversity of marine invertebrates.” Science 321:97–100.