This bibliography gathers publications over many years from a variety of researchers exploring topics of agency, directionality, and function (among others) with a special emphasis on CASP members. It began with work from teams within the initial Agency, Directionality and Function project and continues to be populated with papers and articles from diverse researchers looking to further develop and expand ways of working interdisciplinarily on the complex theme of teleology.
Included in the bibliography are entries for publications and books that many scholars involved in the Agency, Directionality and Function project recommended as foundational texts in their field of study. We welcome suggestions for additions to the bibliography from CASP members.
Medicine
Healy, M. D., McNally, K. E., Butkovič, R., Chilton, M., Kato, K., Sacharz, J., McConville, C., Moody, E. R. R., Shaw, S., Planelles-Herrero, V. J., Yadav, S. K. N., Ross, J., Borucu, U., Palmer, C. S., Chen, K.-E., Croll, T. I., Hall, R. J., Caruana, N. J., Ghai, R., … Cullen, P. J. (2023). Structure of the endosomal Commander complex linked to Ritscher-Schinzel syndrome. Cell, 186(10), 2219-2237.e29.
Hill, J., Fonagy, P., Osel, T., Dziobek, I., & Sharp, C. (2023). The social domains organization of mentalizing processes in adolescents: a contribution to the conceptualization of personality function and dysfunction in young people. Journal of Child Psychology and Psychiatry, jcpp.13838.
Holm, S. (2023). Algorithmic legitimacy in clinical decision-making. Ethics and Information Technology, 25(3), 35.
Holm, S. (2023). On the Justified Use of AI Decision Support in Evidence-Based Medicine: Validity, Explainability, and Responsibility. Cambridge Quarterly of Healthcare Ethics, 1–7.
Keegan, G., & Patten, M. M. (2022). Selfish evolution of placental hormones. Evolution, Medicine, and Public Health, 10(1), 391–397.
Loades, M. E., Midgley, N., Herring, G. T., O’Keeffe, S., Reynolds, S., Goodyer, I. M., Goodyer, I. M., Barrett, B., Byford, S., Dubicka, B., Hill, J., Holland, F., Kelvin, R., Midgley, N., Roberts, C., Senior, R., Target, M., Widmer, B., Wilkinson, P., & Fonagy, P. (2023). In Context: Lessons About Adolescent Unipolar Depression From the Improving Mood With Psychoanalytic and Cognitive Therapies Trial. Journal of the American Academy of Child & Adolescent Psychiatry, S0890856723002319.
Mitchell, J. L., Khan, D., Rana, R. H., Kriek, N., Unsworth, A. J., Sage, T., Bye, A. P., Laffan, M., Shapiro, S., Thakurta, A., Grech, H., Ramasamy, K., & Gibbins, J. M. (2023). Multiple myeloma and its treatment contribute to increased platelet reactivity. Platelets, 34(1), 2264940.
Mitchell, J. L., Little, G., Bye, A. P., Gaspar, R. S., Unsworth, A. J., Kriek, N., Sage, T., Stainer, A., Sangowawa, I., Morrow, G. B., Bastos, R. N., Shapiro, S., Desborough, M. J. R., Curry, N., Gibbins, J. M., Whyte, C. S., Mutch, N. J., & Jones, C. I. (2023). Platelet factor XIII-A regulates platelet function and promotes clot retraction and stability. Research and Practice in Thrombosis and Haemostasis, 7(5), 100200.
Muncke, J., Andersson, A.-M., Backhaus, T., Belcher, S. M., Boucher, J. M., Carney Almroth, B., Collins, T. J., Geueke, B., Groh, K. J., Heindel, J. J., Von Hippel, F. A., Legler, J., Maffini, M. V., Martin, O. V., Peterson Myers, J., Nadal, A., Nerin, C., Soto, A. M., Trasande, L., … Scheringer, M. (2023). A vision for safer food contact materials: Public health concerns as drivers for improved testing. Environment International, 180, 108161.
Nelson, M. R., Gibbins, J. M., & Dunster, J. L. (2023). Platelet-driven routes to chaos in a model of hepatitis. Chaos, Solitons & Fractals, 170, 113338.
Odd, D., Williams, T., Stoianova, S., Rossouw, G., Fleming, P., & Luyt, K. (2023). Newborn Health and Child Mortality Across England. JAMA Network Open, 6(10), e2338055.
Pease, A., Turner, N., Ingram, J., Fleming, P., Patrick, K., Williams, T., Sleap, V., Pitts, K., Luyt, K., Ali, B., & Blair, P. (2023). Changes in background characteristics and risk factors among SIDS infants in England: cohort comparisons from 1993 to 2020. BMJ Open, 13(10), e076751.
Petersen, E., Holm, S., Ganz, M., & Feragen, A. (2023). The path toward equal performance in medical machine learning. Patterns, 4(7), 100790.
Pontarotti, G., & Merlin, F. (2023). From Exposome to Pathogenic Niche. Looking for an Operational Account of the Environment in Health Studies. In É. Giroux, F. Merlin, & Y. Fayet (Eds.), Integrative Approaches in Environmental Health and Exposome Research (pp. 173–206). Springer International Publishing.
Pradeu, T., Daignan‐Fornier, B., Ewald, A., Germain, P., Okasha, S., Plutynski, A., Benzekry, S., Bertolaso, M., Bissell, M., Brown, J. S., Chin‐Yee, B., Chin‐Yee, I., Clevers, H., Cognet, L., Darrason, M., Farge, E., Feunteun, J., Galon, J., Giroux, E., … Laplane, L. (2023). Reuniting philosophy and science to advance cancer research. Biological Reviews, brv.12971.
Provenzale, I., De Simone, I., Gibbins, J. M., Heemskerk, J. W. M., Van Der Meijden, P. E. J., & Jones, C. I. (2023). Regulation of Glycoprotein VI-Dependent Platelet Activation and Thrombus Formation by Heparan Sulfate Proteoglycan Perlecan. International Journal of Molecular Sciences, 24(17), 13352.
Weinstein, N., Hill, J., & Law, W. (2023). Balancing listening and action is key to supportive parenting. Current Opinion in Psychology, 53, 101651.
Methods
Allen, B. (2023). Symmetry in models of natural selection. Journal of The Royal Society Interface, 20(208), 20230306.
Allen, B., & McAvoy, A. (2022). The coalescent with arbitrary spatial and genetic structure (arXiv:2207.02880). arXiv.
Álvarez-Carretero, S., Kapli, P., & Yang, Z. (2023). Beginner’s Guide on the Use of PAML to Detect Positive Selection. Molecular Biology and Evolution, 40(4), msad041.
Álvarez-Carretero, S., Kapli, P., & Yang, Z. (2023). Beginner’s Guide on the Use of PAML to Detect Positive Selection. Molecular Biology and Evolution, 40(4), msad041.
Au, E. H., Fauci, C., Luo, Y., Mangan, R. J., Snellings, D. A., Shoben, C. R., Weaver, S., Simpson, S. K., & Lowe, C. B. (2023). Gonomics: uniting high performance and readability for genomics with Go. Bioinformatics, 39(8), btad516.
Barbier, M. (2023). Perturbation. In B. M. Haddad & B. D. Solomon (Eds.), Dictionary of Ecological Economics (pp. 405–406). Edward Elgar Publishing.
Davín, A. A., Schrempf, D., Williams, T. A., Hugenholtz, P., & Szöllősi, G. J. (2022). Relative Time Inference Using Lateral Gene Transfers. In H. Luo (Ed.), Environmental Microbial Evolution (Vol. 2569, pp. 75–94). Springer US. https://doi.org/10.1007/978-1-0716-2691-7_4